Suhasa Kodandaramaiah
Suhasa started at MIT as a visiting Ph.D. student from Georgia Tech, and worked in the Synthetic Neurobiology group for a period of about two years, where he led the collaborative project to automate in vivo patch clamp recording, for his doctoral thesis. Before attending Georgia Tech, he completed degrees at the University of Michigan and the Vishveshwaraiah Technological University in India. As a postdoc at MIT, he worked on new synergies between mechanical engineering and neuroengineering. He then went on to start his own group as an assistant professor at U. Minnesota.
Publications
Automated Assessment of Loss of Consciousness Using Whisker And Paw Movements During Anesthetic Dosing in Head-Fixed Rodents
Conf Proc IEEE Eng Med Biol Soc | 2018An J, Flores FJ, Kodandaramaiah SB, Betta ID, Nikolaeva K, Boyden ES, Forest CR, Brown EN (2018) Automated Assessment of Loss of Consciousness Using Whisker And Paw Movements During Anesthetic Dosing in Head-Fixed Rodents, Conf Proc IEEE Eng Med Biol Soc 730-733.
Multi-neuron intracellular recording in vivo via interacting autopatching robots
Elife | 2018Kodandaramaiah SB, Flores FJ, Holst GL, Singer AC, Han X, Brown EN, Boyden ES*, Forest CR* (2018) Multi-neuron intracellular recording in vivo via interacting autopatching robots, Elife 7:e24656. (*, co-corresponding authors)
Evidence for long-timescale patterns of synaptic inputs in CA1 of awake behaving mice
Journal of Neuroscience | 2017Kolb I*, Franzesi GT*, Wang M, Kodandaramaiah SB, Forest CR, Boyden ES+, Singer AC+ (2017) Evidence for long-timescale patterns of synaptic inputs in CA1 of awake behaving mice, Journal of Neuroscience 38(7):1821-1834. (*, co-first authors; +, co-corresponding authors)
Near-Infrared Fluorescent Proteins Engineered from Bacterial Phytochromes in Neuroimaging
Biophysical Journal | 2017Piatkevich KD, Suk HJ, Kodandaramaiah SB, Yoshida F, DeGennaro EM, Drobizhev M, Hughes TE, Desimone R, Boyden ES*, Verkhusha VV* (2017) Near-Infrared Fluorescent Proteins Engineered from Bacterial Phytochromes in Neuroimaging, Biophysical Journal 113(10):2299-2309. (*, co-corresponding authors)
Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo
Neuron | 2017Ho-Jun Suk, Ingrid van Welie, Suhasa B. Kodandaramaiah, Brian Allen, Craig R. Forest, Edward S. Boyden (2017) Closed-Loop Real-Time Imaging Enables Fully Automated Cell-Targeted Patch-Clamp Neural Recording In Vivo, Neuron 95(5):1037-1047.
Noninvasive Deep Brain Stimulation via Temporally Interfering Electric Fields
Cell | 2017Grossman N, Bono D, Dedic N*, Kodandaramaiah SB*, Rudenko A, Suk HJ, Cassara AM, Neufeld E, Kuster N, Tsai LH, Pascual-Leone A, Boyden ES (2017) Noninvasive Deep Brain Stimulation via Temporally Interfering Electric Fields, Cell 169(6):1029-1041. (* equal contribution)
Mesoscale-duration activated states gate spiking in response to fast rises in membrane voltage in the awake brain
Journal of Neurophysiology | 2017Annabelle C. Singer*, Giovanni Talei Franzesi*, Suhasa B. Kodandaramaiah, Francisco J. Flores, Jeremy D. Cohen, Albert K. Lee, Christoph Borgers, Craig R. Forest, Nancy J. Kopell, Edward S. Boyden (2017) Mesoscale-duration activated states gate spiking in response to fast rises in membrane voltage in the awake brain, Journal of Neurophysiology 118(2):1270-1291.
Integration of autopatching with automated pipette and cell detection in vitro
Journal of Neurophysiology | 2016Wu Q, Kolb I, Callahan BM, Su Z, Stoy W, Kodandaramaiah SB, Neve RL, Zeng H, Boyden ES, Forest CR, Chubykin AA (2016) Integration of autopatching with automated pipette and cell detection in vitro, Journal of Neurophysiology 116(4):1564-1578.
Assembly and operation of the autopatcher for automated intracellular neural recording in vivo
Nature Protocols | 2016Kodandaramaiah, S.B., Holst, G.L., Wickersham, I.R., Singer, A.C., Talei Franzesi, G., McKinnon, M.L., Forest, C.R., Boyden, E.S. (2016) Assembly and operation of the autopatcher for automated intracellular neural recording in vivo, Nature Protocols 11:634–654.
Stress Enables Reinforcement-Elicited Serotonergic Consolidation of Fear Memory
Biological Psychiatry | 2015Baratta MV, Kodandaramaiah SB, Monahan PE, Yao J, Weber MD, Lin PA, Gisabella B, Petrossian N, Amat J, Kim K, Yang A, Forest CR, Boyden ES, Goosens KA (2015) Stress Enables Reinforcement-Elicited Serotonergic Consolidation of Fear Memory, Biological Psychiatry 79(10):814-22.
Microchip amplifier for in vitro, in vivo, and automated whole-cell patch-clamp recording
Journal of Neurophysiology | 2014Harrison R.R., Kolb I., Kodandaramaiah S.B., Chubykin A.A., Yang A., Bear M.F., Boyden E.S.*, Forest C.* (2014) Microchip amplifier for in vitro, in vivo, and automated whole-cell patch-clamp recording, Journal of Neurophysiology 113(4):1275-82. (*, equal contribution)
Noninvasive optical inhibition with a red-shifted microbial rhodopsin
Nature Neuroscience | 2014Chuong, A. S., Miri, M. L.*, Busskamp, V.*, Matthews, G.A.C.*, Acker, L.C.*, Soresnsen, A.T., Young, A., Klapoetke, N. C., Henninger, M.A., Kodandaramaiah, S.B., Ogawa, M., Ramanlal, S. B., Bandler, R. C., Allen, B. D., Forest, C.R., Chow, B.Y., Han, X., Lin, Y., Tye, K.M., Roska, B., Cardin, J.A., Boyden, E. S. (2014) Noninvasive optical inhibition with a red-shifted microbial rhodopsin, Nature Neuroscience 17:1123-1129. (*, equal contribution)
LINEAR MICRO-ACTUATION SYSTEM FOR PATCH-CLAMP RECORDING
30th Annual Meeting of the American Society for Precision Engineering | 2014Ilya Kolb, Gregory L. Holst, Max A. Stockslager, Suhasa B. Kodandaramaiah, William Stoy, Edward S. Boyden, Craig R. Forest (2015) LINEAR MICRO-ACTUATION SYSTEM FOR PATCH-CLAMP RECORDING, Proceedings of the 30th Annual Meeting of the American Society for Precision Engineering.
Fully-automated, in-vivo, single cell electrophysiology
Proceedings of the 28th Annual Meeting of the American Society for Precision Engineering | 2013J. Go, A. Fan, C. Lu, S.B. Kodandaramaiah, G.L. Holst, W. Stoy, I. Kolb, E.S. Boyden, C.R. Forest (2013) Fully-automated, in-vivo, single cell electrophysiology, Proceedings of the 28th Annual Meeting of the American Society for Precision Engineering, Saint Paul, MN, Oct 20-25, 2013.
In vivo robotics: the automation of neuroscience and other intact-system biological fields
Annals of the New York Academy of Sciences | 2013Kodandaramaiah, S. B., Boyden, E. S.*, Forest, C. F.* (2013) In vivo robotics: the automation of neuroscience and other intact-system biological fields, Annals of the New York Academy of Sciences, 1305(1):63-71. (* co-corresponding authors)
Automated, in-vivo, whole-cell electrophysiology using an integrated patch-clamp amplifier
Proceedings of the 22nd Annual Computational Neuroscience Meeting | 2013I. Kolb, G. Holst, B. Goldstein, S.B. Kodandaramaiah, E.S. Boyden, E. Culurciello, C.R. Forest (2013) Automated, in-vivo, whole-cell electrophysiology using an integrated patch-clamp amplifier, Proceedings of the 22nd Annual Computational Neuroscience Meeting (CNS 2013), Paris, France, July 13-18, 2013.
Automated whole-cell patch clamp electrophysiology of neurons in vivo
Nature Methods | 2012Kodandaramaiah, S., Talei Franzesi, G., Chow, B., Boyden, E. S.*, Forest, C.* (2012) Automated whole-cell patch clamp electrophysiology of neurons in vivo, Nature Methods 9:585–587. (* co-corresponding authors)
Characterization of translation of fused silica micropipettes in non-rectilinear trajectories
Proceedings of the 26th Annual Meeting of the American Society for Precision Engineering | 2011Kodandaramaiah, S., Krijnen, M., Go, J., Malik, S., Sondej, N., Khatait, J. P., Boyden, E. S., Aarts, R. G. K. M., Brouwer, D. M., Forest, C. F. (2011) Characterization of translation of fused silica micropipettes in non-rectilinear trajectories, Proceedings of the 26th Annual Meeting of the American Society for Precision Engineering, Denver, CO.