bioRxiv |
2025
Park SY*, Sheridan A*, An B, Jarvis E, Lyudchik J, Patton W, Axup JY, Chan SW, Damstra HGJ, Leible D, Leung KS, Magno CA, Meeran A, Michalska JM, Rieger F, Wang C, Wu M, Church GM, Funke J, Huffman T, Leeper KGC**, Truckenbrodt S**, Winnubst J**, Kornfeld JMR, Boyden ES+, Rodriques SG***, Payne AC+*** (2025) Combinatorial protein barcodes enable self-correcting neuron tracing with nanoscale molecular context, bioRxiv 2025.09.26.678648, doi: 10.1101/2025.09.26.678648. (*, contributed equally; **, contributed equally; ***, contributed equally; +, co-corresponding)
Nature Biotechnology |
2020
Samuel G. Rodriques*, Linlin M. Chen*, Sophia Liu, Ellen D. Zhong, Joseph R. Scherrer, Edward S. Boyden**, Fei Chen** (2020) RNA timestamps identify the age of single molecules in RNA sequencing, Nature Biotechnology 39:320–325. (*, equal contribution, **, co-corresponding)
PLoS One |
2019
Rodriques SG, Marblestone AH, Boyden ES (2019) A theoretical analysis of single molecule protein sequencing via weak binding spectra, PLoS One 14(3):e0212868.
Science |
2018
D. Oran*, S. G. Rodriques*, R. Gao, S. Asano, M. A. Skylar-Scott, F. Chen, P. W. Tillberg, A. H. Marblestone**, E. S. Boyden** (2018) 3D nanofabrication by volumetric deposition and controlled shrinkage of patterned scaffolds, Science 362(6420):1281-1285. (*, equal contributors; **, equal contributors)
Journal of Biomedical Optics |
2016
Rodriques, S.G.*, Marblestone, A.H*, Scholvin, J., Dapello, J., Sarkar, D., Mankin, M., Gao, R., Wood, L., and Boyden, E.S. (2016) Multiplexed neural recording along a single optical fiber via optical reflectometry, Journal of Biomedical Optics 21(5):057003. (*, co-first authors)